Molekulare Taxonomie

Forschung

ProTeom X

EXIST-Förderung für innovative Identifikation von Arten mittels Proteinanalyse als kostengünstige und schnelle Alternative zu DNA basierten Verfahren.

StartUp biome-id:

Expertise in molekularer Artidentifikation

Im Rahmen des Unternehmens bieten wir unsere Expertise als Serviceleistung für Unternehmen aus der privaten Wirtschaft sowie für staatliche Institutionen an.

Basierend auf der Analyse von DNA garantieren wir eine schnelle und zuverlässige Identifikation von Organismen. Je nach Kundenwunsch analysieren wir einzelne Individuen oder Teile davon, Mischproben oder DNA aus Wasser- und Bodenproben.

Alternativ bieten wir eine schnelle und kostengünstige Methode zur Artidentifikation basierend auf der Analyse von Proteinen (siehe ProteomX).

Unser Methoden: DNA-Barcoding, Metabarcoding, eDNA-Analysen und Proteomik.

Unser Expertise umfasst die Analyse von:

  • Fischen, Fischlarven und Fischeiern
  • Fischprodukten
  • Schädlingen sowie deren Eier und Larven aus Land- und Forstwirtschaft
  • Parasiten von Haus- und Nutztieren
  • Teilen von Organismen (Fleisch, Fell, Haut und Blut)
  • Proben für ökologische Gutachten (Zooplankton, Benthos und Malaisefallen)
  • Proben zur Erkennung invasiver Arten
  • eDNA aus Boden- und Wasserproben zum Nachweis spezifischer Arten

Kontaktieren Sie uns und wir unterstützen Sie ganz individuell um eine optimale Lösung für IhreFragestellung zu erarbeiten.

Kontakttknebelsberger@senckenberg.de

ProteomX Team

Dr.  Silke Laakmann
PostDoc
Forschungsgebiete    

Begutachtete Publikationen: 

2017 
BODE, M., LAAKMANN, S., KAISER, P., HAGEN, W., AUEL, H., CORNILS, A.
 (2017) Unraveling diversity of deep-sea copepods using integrated morphological and molecular techniques. Journal of Plankton Research 1-18. DOI: 10.1093/plankt/fbx031.                            

LAAKMANN, S., BOOS, K., KNEBELSBERGER, T., RAUPACH, M.J., NEUMANN, H. (2017) Species identification of echinoderms from the North Sea by combining morphology and molecular data. Helgoland Marine Research 70:18. DOI: 10.1186/s10152-016-0468-5


2016
BARCO, A., RAUPACH, M.J., LAAKMANN, S., NEUMANN, H., KNEBELSBERGER, T. (2016) Identification of North Sea molluscs with DNA barcoding. Molecular Ecology Resources 16: 288-297.

2015
MOHRBECK, I., RAUPACH, M.J., MARTÍNEZ ARBIZU, P., KNEBELSBERGER, T., LAAKMANN, S. (2015) High- throughput sequencing – The Key to Rapid Biodiversity Assessment of Marine Metazoa? Public Library of Science ONE 10: e0140342.

RAUPACH, M.J., BARCO, A., STEINKE, D., BEERMANN, J., LAAKMANN, S., NEUMANN, H., KIHARA, T., C., POINTNER, K., RADULOVICI, A., SEGELKEN-VOIGT, A., WESSE, C., KNEBELSBERGER, T. (2015) The application of DNA barcodes for the identification of marine crustaceans from the North Sea and adjacent regions. Public Library of Science ONE, DOI: 10.1371/journal.pone.0139421.

PECK, N., PETERS, J., DIEKMANN, R., LAAKMANN, S., RENZ, J. (2015) Interactive effects of temperature and salinity on population dynamics of the calanoid copepod Acartia tonsa. Journal of Plankton Research 37(1): 197-210.

2014
LAAKMANN, S. & HOLST, S. 
(2014) Emphasizing the diversity of North Sea hydromedusae by combined morphological and molecular methods. Journal of Plankton Research 36(1): 64-76.

HOLST, S. & LAAKMANN, S. (2014) Morphological and molecular discrimination of two closely related jellyfish species, Cyanea capillata and C. lamarckii (Cnidaria, Scyphozoa), from the northeast Atlantic. Journal of Plankton Research 36(1): 48-63.

MARKHASEVA, E.L., LAAKMANN, S., RENZ, J. (2014) An interim synopsis of the Bradfordian families with a description of Thoxancalanus spinatus (Copepoda: Calanoida), a new diaxid genus and species from the deep Atlantic Ocean. Marine Biodiversity 44: 63-88.

KHODAMI, S., MARTÌNEZ ARBIZU, P., STÖHR, S., LAAKMANN, S. (2014) Molecular species delimination of Icelandic brittle stars (Ophiuroidea). Polish Polar Research 35: 243-260.

KNEBELSBERGER, T., LANDI, M., NEUMANN, H., KLOPPMANN, M., SELL, A.F., CAMPBELL, P.D., LAAKMANN, S., RAUPACH, M.J., CARVALHO, G.R., COSTA, F.O. (2014) A reliable DNA barcode reference library for the identification of the North European shelf fish fauna. Molecular Ecology Resources 14: 1060–1071.

RAUPACH, M.J., BININDA-EMONDS, O.R.P., KNEBELSBERGER, T., LAAKMANN, S., PFÄNDER, J., LEESE, F. (2014) Phylogeographic analysis of the common sea slater Ligia oceanica (Crustacea: Isopoda) reveals two deep divergent mitochondrial lineages. Biological Journal of the Linnean Society 112: 16-30.

2013
LAAKMANN, S., GERDTS, G., ERLER, R., KNEBELSBERGER, T., MARTÍNEZ ARBIZU, P. & RAUPACH, M.J. 
(2013) Comparison of molecular species identification for North Sea calanoid copepods (Crustacea) using proteome fingerprints and DNA sequences. Molecular Ecology Resources 13: 862-876.

2012
LAAKMANN, S., AUEL, H. & KOCHZIUS, M. (2012) Evolution in the deep sea: Biological traits, ecology and phylogenetics of pelagic copepods. Molecular Phylogenetics and Evolution 65: 535-546.

2010
LAAKMANN, S. & AUEL, H. 
(2010) Longitudinal and vertical trends in stable isotope signatures (δ13C and δ15N) of omnivorous and carnivorous copepods across the South Atlantic Ocean. Marine Biology 157: 463-471.

2009
LAAKMANN, S., KOCHZIUS, M. & AUEL, H. 
(2009) Ecological niches of Arctic deep-sea copepods: Vertical partitioning, dietary preferences and different trophic levels minimize inter-specific competition. Deep-Sea Research 56: 741-756.

LAAKMANN, S., STUMPP, M. & AUEL, H. (2009) Vertical distribution and dietary preferences of deep-sea copepods (Euchaetidae and Aetideidae, Calanoida) in the vicinity of the Antarctic Polar Front. Polar Biology 32: 679-689.

2007
MALZAHN, A.M., CLEMMESEN, C., WILTSHIRE, K.H., LAAKMANN, S. & BOERSMA, M. 
(2007) Comparative nutritional condition of larval dab Limanda limanda and lesser sandeel Ammodytes marinus in a highly variable environment. Marine Ecology Progress Series: 334: 205-212.
 

 

Nicht begutachtete Publikationen:

2010
LAAKMANN, S. & RAUPACH, M.J.
 (2010) Molekulare Taxonomie mariner Organismen der Nordsee. Natur und Museum 140 (5/6), 142-143.

RAUPACH, M.J., KNEBELSBERGER, T. & LAAKMANN, S. (2010) Molekulare Taxonomie mariner Organismen am Forschungsinstitut Senckenberg. GfBS Newsletter 24, 20-21. 

KNEBELSBERGER, T., DITZLER, S., LAAKMANN, S., MOHRBECK, I. & RAUPACH, M.J. (2010) Molecular techniques for identifying North Sea fauna. In: Nimis, P.L., Vignes Lebbe, R. [Hrsg.]: Tools for identifying Biodiversity: Progress and Problems. Studio Pixart, Venedig, 349.

2009
LAAKMANN, S. 
(2009) The Ecology and Evolution of Deep-Sea Copepods: Niche Separation in a Three-Dimensional habitat. Doktorarbeit. Universität Bremen

2006
BOERSMA, M, AUGUSTIN, C.B., KNOTZ, S., SCHÜTTE, T. MALZAHN, A.M., LAAKMANN, S. & VAN BEUSEKOM, J.E.E. 
(2006) Effects of nutritional quality on copepod reproduction. International GLOBEC Newsletter 12(1): 67-69.

2004
LAAKMANN, S.
 (2004) Abundanz und Reproduktionserfolg ausgewählter calanoider Copepoden während der Frühjahrsplanktonblüte um Helgoland. Diplomarbeit. Universität Bremen.

 

Bücher und Buchartikel: 
2006 
LAAKMANN, S. 
(2006) Der Continuous Plankton Recorder (CPR) für den groben Überblick. In: Hempel, G., Hempel, I. & Schiel, S. [Hrsg.]: Faszination Meeresforschung – Ein ökologisches Lesebuch. H.M. Hauschild, Bremen, 128-129.

 

 


Filme und Digital objects:
MOHRBECK, I., MARTÍNEZ ARBIZU, P., RAUPACH, M.J. & LAAKMANN, S.
 (2011) DNA barcoding of the North Sea zooplankton: Biodiversity assessment by a molecular taxonomic interpretation. World Conference on Marine Biodiversity, 26-30 Sept 2011, Aberdeen, Scotland (UK).

Vortrag (internationale Konferenzen)

2016
LAAKMANN, S., KNEBELSBERGER, T., HOLST, S.: Integrated North Sea zooplankton identification: a combination of morphology, DNA and proteome analyses towards a cost and time-effective application. ICES/PICES 6th Zooplankton Production Symposium, 09-13 May 2016, Bergen, Norway.

2015
HOLST, S., LAAKMANN, S.: Diversity of North Sea hydromedusae: Extending the knowledge from morphological species identification by molecular genetic COI analyses. The 8th Workshop of the Hydrozoan Society, 20-27 June 2015, Ischia, Italia.

2013
HOLST, S. & LAAKMANN, S.: Combined morphological and molecular identification methods in Scypho- and Hydromedusae. 4th International Jellyfish Bloom Symposium, 05-07 June 2013, Hiroshima, Japan

KNEBELSBERGER, T., COSTA, F., LAAKMANN, S., LANDI, M. & THIEL, R.: Evaluation of DNA barcoding and proteome fingerprints for the identification of fish species from the Northern European shelf. 5th International Barcode of Life Conference, 27-31 Oct 2013, Kunming, China.

2012
KNEBELSBERGER, T., DUBILIER, N., LAAKMANN, S., HOFMANN, T. & RAUPACH, M.J..:
 Identification of North Sea fish using DNA barcoding and ribosomal RNA in situ hybridization techniques. Fish Barcode of Life World Conference, 12-14 June 2012, Yeosu, Korea

2011
AUEL, H., TEUBER, L. & LAAKMANN, S.:
 Evolution in 3 dimensions – Biodiversity of pelagic midwater and deep-sea communities. World Conference on Marine Biodiversity, 26-30 Sept 2011, Aberdeen, Scotland (UK).

KNEBELSBERGER, T., DUBLIER, N., LAAKMANN, S., RAUPACH, M.J. & HOFMANN, T.: The next step: rapid molecular in situ species identification. 4th International Barcode of Life Conference, 30 Nov – 03 Dec 2011, Adelaide, Australia.

RAUPACH, M.J., LAAKMANN, S., MOHRBECK, I. & KNEBELSBERGER, T.: Biodiversity assessment of the North Sea fauna using DNA barcodes and other molecular methods. 4th International Barcode of Life Conference, 30 Nov – 03 Dec 2011, Adelaide, Australia.

LAAKMANN, S., MOHRBECK, I., KNEBELSBERGER, T. & RAUPACH, M.J.: Do we know the known? Zooplankton biodiversity of the North Sea. 5th International Zooplankton Production Symposium, 14-18 March 2011, Pucón, Chile.

2010
PECK, A.M., DIEKMANN, B., HOLSTE, L., LAAKMANN, S., PETERS, J., RENZ, J. & SCHULZ, N.:
 A synthesis of vital rate research performed on Acartia tonsa (Copepoda, Calanoida): Developing a “cause and effect” understanding of climate-driven changes within and among populations. Climate Change Impacts on Estuarine and Coastal Ecosystem: a zooplankton perspective (Workshop), 28-30 June 2010, Boulogne sur mer, France.  

2009
LAAKMANN, S., KOCHZIUS, M. & AUEL, H.: Co-existence in the pelagic deep sea: mechanisms of spatial and trophic niche separation. ICES Annual Science Conference 2009, 21-25 Sept 2010, Berlin, Germany.

AUEL, H. & LAAKMANN, S.: Evolution in 3 dimensions – Biodiversity of pelagic midwater and deep-sea communities. Galapagos Science Symposium, 20-24 July 2009, Galapagos.

LAAKMANN, S., AUEL, H. & KOCHZIUS, M.: Phylogenetic relationships and ecology of pelagic deep-sea copepods (Euchaetidae and Aetideidae). MarBOL (Marine Barcoding of Life) Symposium, 16-17 April 2009, Bremerhaven, Germany.

2008
AUEL, H. & LAAKMANN, S.:
 Biodiversity and ecological niches of deep-sea copepods: vertical partitioning, dietary preferences and different trophic levels minimize interspecific competition. World Conference on Marine Biodiversity, 11-15 Nov 2008, Valencia, Spain.

Vortrag (nationale Konferenzen)

2014
MARKHASEVA, E.L., LAAKMANN, S., RENZ, J.: “Bradfordian” calanoid copepods from the near-bottom of the World Ocean. 8th International Crustacean Congress, 18-23 Aug 2014, Frankfurt a. M., Germany.

2013
RAUPACH, M.J., KNEBELSBERGER, T., LAAKMANN, S., HOFMANN, T., MOHRBECK, I. & MARTÍNEZ ARBIZU, P.: 
Die molekulargenetische Erfassung der Nordseefauna: Einblicke in die genetische Variabilität der Crustacea. 16. Crustaceologen-Tagung, 14-17 March 2013, Greifswald, Germany

2005
LAAKMANN, S., SABOROWSKI, R. & HAGEN, W.:
 Reproductive strategies and feeding ecology of two dominant copepod species in the North Sea – a comparison. 12. Crustaceologen-Tagung, 17-20 Feb 2005, Wilhelmshaven, Germany. Award for seconds best student talk

Vortrag (andere)

2015
LAAKMANN, S.: 
Molecular taxonomic approaches in zooplankton research. Ocean Sciences Colloquium, 25 Nov 2015, Bremen, Germany.

2013
LAAKMANN, S.:
 Molecular taxonomic approaches in zooplankton research. Biologisch-Ozeanografisches und Fischereiwissenschaftliches Kolloquium, Institute for Hydrobiology and Fisheries Science, University of Hamburg, 28 Nov 2013, Hamburg, Germany.

2010
LAAKMANN, S.:
 The ecology and evolution of deep-sea copepods: niche separation in a three-dimensional habitat. Biologisch-Ozeanografisches und Fischereiwissenschaftliches Kolloquium, Institute for Hydrobiology and Fisheries Science, University of Hamburg, 23 June 2010, Hamburg, Germany.

Poster

016
RENZ, J., LAAKMANN, S. & MARKHASEVA, E.L.: Possibilities and challenges for using morphological and molecular methods to unravel mysteries in the phylogeny of typical benthopelagic deep-sea calanoids. ICES/PICES 6th Zooplankton Production Symposium, 09-13 May 2016, Bergen, Norway.

BODE, M., CORNILS, A., KAISER, P., HAGEN, W., AUEL, H. & LAAKMANN, S.: MALDI-TOF mass spectrometry as a novel tool for zooplankton biodiversity studies – Copepod distribution throughout the eastern Atlantic Ocean. ICES/PICES 6th Zooplankton Production Symposium, 09-13 May 2016, Bergen, Norway.

MOHRBECK, I., RAUPACH, M.J., KNEBELSBERGER, T., MARTÍNEZ ARBIZU, P. & LAAKMANN, S.: Evaluating DNA-based identifications of next-generation sequencing and classical sanger sequencing using a comprehensive 18S rDNA reference library of the North Sea metazoan fauna. ICES/PICES 6th Zooplankton Production Symposium, 09-13 May 2016, Bergen, Norway.

AUEL, H., BODE, M., KAISER, P., LAAKMANN, S. & TEUBER, L.: Evolution in 3 dimensions – Biodiversity of midwater deep-sea zooplankton communities. ICES/PICES 6th Zooplankton Production Symposium, 09-13 May 2016, Bergen, Norway.

2014
H
OLST, S. & LAAKMANN, S.: Integrated morphological and molecular genetic taxonomy in North Sea Jellyfish. BioDivEvo 2014, 24-27 March 2014, Dresden, Germany.

2013
LAAKMANN, S. & KNEBELSBERGER, T.:
 Integrating morphology, DNA barcodes and proteome fingerprints for the identification of marine metazoan species. 5th International Barcode of Life Conference, 27-31 oct 2013, Kunming, China.

2012
LAAKMANN, S., KNEBELSBERGER, T., MOHRBECK, I., HOFMANN, T., BORGES, V., MARTÍNEZ ARBIZU, P. & RAUPACH, MJ.:
 Molekulargenetische Biodiversitätsstudie der Nordseefauna. Nationales Biodiversitätsmonitoring 2020, 14-15 June 2012, Berlin, Germany.

2011
LAAKMANN, S., HOLST, S., KNEBELSBERGER, T., RAUPACH, M.J., MARTÌNEZ ARBIZU, P. & MOHRBECK, I.:
Application of molecular genetic tools in the assessment of North Sea zooplankton diversity. 4th International Barcode of Life Conference, 30 Nov – 03 Dec 2011, Adelaide, Australia.

KNEBELSBERGER, T., GEIGER, M., HENDRICH, L., HOFMANN, T., LAAKMANN, S., NEUMANN, H., RAUPACH, M.J. & HASZPRUNAR, G.: Identifying German freshwater and marine fishes through DNA barcoding. 4th International Barcode of Life Conference, 30 Nov – 03 Dec 2011, Adelaide, Australia.

RAUPACH, M.J., BEERMANN, J., KNEBELSBERGER, T., LAAKMANN, S., MOHRBECK, I. & NEUMANN, H.: DNA barcoding of Crustaceans from the North Sea. 4th International Barcode of Life Conference, 30 Nov – 03 Dec 2011, Adelaide, Australia.

MOHRBECK, I., LAAKMANN, S., KNEBELSBERGER, T. & RAUPACH, M.J.:
First insights into the molecular diversity of the North Sea zooplankton. 5th International Zooplankton Production Symposium, 14-18 March 2011, Pucón, Chile.

KNEBELSBERGER, T., LAAKMANN, S., MOHRBECK, I. & RAUPACH, M.J.: Biodiversiy assessment of t he North Sea fauna using molecular techniques. Biosystematics, 21-27 Feb 2011, Berlin, Germany.

RAUPACH, M.J., KNEBELSBERGER, T., LAAKMANN, S., MOHRBECK, I., NEUMANN, H. & BEERMANN, J.: DNA barcoding of Amphipoda from the North Sea. New frontiers in Monitoring European Biodiversity Conference, 27-29 Sept 2011, Palermo, Italy.

2010
LAAKMANN, S., MOHRBECK, I., KNEBELSBERGER, T., DITZLER, S. & RAUPACH, M.J.:
 The marine fauna of the North Sea: species identification using molecular methods. 103. Jahrestagung der Deutschen Zoologischen Gesellschaft, 17-21 Sept 2010, Hamburg, Germany.

KNEBELSBERGER, T., DITZLER, S., LAAKMANN, S., MOHRBECK, I. & RAUPACH, M.J.: Molecular techniques for identifying North Sea fauna. Bioidentify – Tools for identifying biodiversity: progress and problems, 20-22 Sept 2010, Paris, France.

KNEBELSBERGER, T., LAAKMANN, S., MOHRBECK, I. & RAUPACH, M.J.: Die Fauna der Nordsee – Molekulare Methoden zur Erfassung der Artenvielfalt. WissensWerte – Bremer Forum für Wissenschaftsjournalismus, 08-10 Nov 2010, Bremen, Germany.

RAUPACH, M.J., KNEBELSBERGER, T., LAAKMANN, S. & MOHRBECK, I.: Species identification of the North Sea fauna using molecular methods. International Conference _mce_on Biodiversity and the UN Millenium Development Goals: Challenges for Research and Action, 01-03 Dec 2010, Frankfurt/Main, Germany.

2007
LAAKMANN, S., AUEL, H. & KOCHZIUS, M.:
 Ecological niches in an almost homogeneous environment  – Deep-sea copepods in Polar Seas. 4th International Zooplankton Production Symposium, 28 May – 01 June 2007, Hiroshima, Japan.

2005
MALZAHN, A.M:, CLEMMESEN, C., WILTSHIRE, K.H., LAAKMANN, S. & BOERSMA, M.:
 Trophic interactions between copepods, larval fish and ctenophores during a spring bloom at Helgoland Roads. ASLO Summer Meeting, 19-24 June 2005, Santiago de Compostela, Spain.

Dr.  Thomas Knebelsberger
Wissenschaftlicher Mitarbeiter
Forschungsgebiete:
  • Molekulare Methoden zur Identifikation von Organismen
 
  • Technologietransfer: Startup „biome-id“   
 
  • Projekt ProteomX: Identifikation von Organismen durch Proteinanalyse

Begutachtete Publikationen:

2017

GÜNTHER, B. RAUPACH, M.J., KNEBELSBERGER, T. (2017) Full-length and mini-length DNA barcoding for the identification of seafood commercially traded in Germany. Food Control 73922-929.

HOFMANN, T., KNEBELSBERGER, T. KLOPPMANN, M., ULLEWEIT, J., RAUPACH, M.J. (2017) Egg identification of three economical important fish species using DNA barcoding in comparison to a morphological determination. Journal of Applied Ichthyology 33(5): 925-932.

2016

THIEL, R. & KNEBELSBERGER, T. (2016)  How reliably can northeast Atlantic sand lances of the genera Ammodytes and Hyperoplus be distinguished? A comparative application of morphological and molecular methods. ZooKeys 617: 139–164.

LAAKMANN, S., BOOS, K., KNEBELSBERGER, T., RAUPACH, M.J., NEUMANN, H. (2016) Species identification of echinoderms from the North Sea by combining morphology and molecular data. Helgoland Marine Research 70(1): UNSP 18.

BARCO, A., RAUPACH, M.J., LAAKMANN, S., NEUMANN, H. & KNEBELSBERGER, T. (2016) Identification of North Sea molluscs with DNA barcoding. Molecular Ecology Resources 16: 288-297.

OLIVEIRA, L.M., KNEBELSBERGER, T., LANDI, M., SOARES, P., RAUPACH, M.J., COSTA F.O. (2016) Assembling and auditing a comprehensive DNA barcode reference library for European marine fishes. Journal of Fish Biology 89 (6): 2741-2754.

2015

RAUPACH, M.J., BARCO, A., BEERMANN, J., KIENEKE, A., LAAKMANN, S., MOHRBECK, I., NEUMANN, H., KNEBELSBERGER, T.  (2015) Crabs, scallops, fish, and more: barcoding the marine fauna of the North Sea. Genome 58, 270.

MOHRBECK, I., RAUPACH, M.J., MARTINEZ ARBIZU, P., KNEBELSBERGER, T. & LAAKMANN, S. (2015) Quantity versus quality: high-throughput sequencing – the key to a rapid biodiversity assessment of marine Metazoa? Public Library of Science _mce_ONE 10: e0140342.

RAUPACH, M.J. & KNEBELSBERGER, T. (2015) Taxonomie im Wandel. Biologie in unserer Zeit 45: 315-321.

RAUPACH, M.J., BARCO, A., STEINKE, D., BEERMANN, J., LAAKMANN, S., MOHRBECK, I., NEUMANN, H., KIHARA, T.C., POINTNER, K., RADULOVICI, A., SEGELKEN-VOIGT, A., WESSE, C. & KNEBELSBERGER, T. (2015) The application of DNA barcodes for the identification of marine crustaceans from the North Sea and adjacent regions. Public Library of Science ONE 10: e0139421.

GEBHARDT, K. & KNEBELSBERGER, T. (2015). Identification of cephalopod species from the North and the Baltic Seas using morphology, COI and 18S rDNA sequences. Helgoland Marine Research 69:259–271.

HOFMANN, T., RAUPACH, M.J., MARTÍNEZ ARBIZU, P., KNEBELSBERGER, T. (2015) An application of in situ hybridization for the identification of commercially important fish species. Fisheries Research 170: 1-8.

KNEBELSBERGER, T., DUNZ, A.R., NEUMANN, D., GEIGER, M.F. (2015) Molecular Diversity of Germany’s Freshwater Fishes and Lampreys assessed by DNA barcoding. Molecular Ecology Resources 15: 562–572.

BOETERS, H.D., CALLOT-GIRARDI, H., KNEBELSBERGER, T. (2015) News of Pseudamnicola (Corrosella) in its distinct West European distribution area (Mollusca: Gastropoda: Truncatelloidea). Folia Malacologica 23: 95–119.

2014

KNEBELSBERGER, T., DUNZ, A.R., NEUMANN, D., GEIGER, M.F. (2014) Data from: Molecular Diversity of Germany’s Freshwater Fishes and Lampreys assessed by DNA barcoding. Dryad Digital Repository. doi:10.5061/dryad.8s21m.

BOETERS, D. B. & KNEBELSBERGER, T. (2014). Spring snails (Bythinella spp.) as lake snails? Lake profundal, an 
unexplored habitat. Archiv für Molluskenkunde 143: 135-152.

KNEBELSBERGER, T. & THIEL, R. (2014) Identification of gobies (Teleostei: Perciformes: Gobiidae) from the North and Baltic Seas combining morphological analysis and DNA barcoding. Zoological Journal of the Linnenan Society 172: 831–845.

RAUPACH, M.J., BININDA-EMONDS, O.R.P., KNEBELSBERGER, T., LAAKMANN, S., PFÄNDER, J., LEESE, F. (2014) Phylogeographic analysis of the common sea slater Ligia oceanica (Crustacea: Isopoda) reveals two deep divergent mitochondrial lineages and a significant population structure. Biological Journal of the Linnenan Society 112: 16-30.

KNEBELSBERGER, T., LANDI, M., NEUMANN, H., KLOPPMANN, M., SELL, A.F., CAMPBELL, P.D., LAAKMANN, S., RAUPACH, M.J., CARVALHO, G.R., COSTA, F.O. (2014) A reliable DNA barcode reference library for the identification of the North European shelf fish fauna. Molecular Ecology Resources 14: 1060-1071.

KNEBELSBERGER, T. (2014) Data from: A reliable DNA barcode reference library for the identification of the European shelf fish fauna. Dryad Digital Repository. doi:10.5061/dryad.rn636.

2013

STÖGER, I., SIGWART, J. D., KANO, Y., KNEBELSBERGER, T., MARSHALL, B. A., SCHWABE, E., SCHRÖDL, M. (2013) The continuing debate on deep molluscan phylogeny: Evidence for Serialia (Mollusca, Monoplacophora + Polyplacophora). BioMed Research. Article ID 407072. 

SIGWART, J. D., STÖGER, I., KNEBELSBERGER, T., SCHWABE, E. (2013) Chiton phylogeny (Mollusca: Polyplacophora) and the placement of the enigmatic species Choriplax grayi (H. Adams & Angas, 1864). Invertebrate Systematics 27: 603–621.

LAAKMANN, S., GERDTS, G., ERLER, R., KNEBELSBERGER, T., MARTÍNEZ ARBIZU, P. & RAUPACH, M.J. (2013)Comparison of molecular species identification for North Sea calanoid copepods (Crustacea) using proteome fingerprints and DNA sequences. Molecular Ecology Resources 13: 862-876.

2012

KNEBELSBERGER, T. & STÖGER, I. (2012) DNA Extraction, Preservation and Amplification. In: Kress WJ, Erickson DL, editors. Methods in Molecular Biology, DNA BARCODES: METHODS AND PROTOCOLS 858: 311-338. Berlin: Humana Press, Springer Science+Publishing Media, LLC.

BOETERS, D. B. & KNEBELSBERGER, T. (2012) Revision of selected species of Bythinella MOQUIN-TANDON 1856 from Central Europe using morphology, anatomy and DNA barcodes (Caenogastropoda: Rissooidea). Archiv für Molluskenkunde141 (1): 115-136.

2010

JÖRGER, K. M., STÖGER, l., KANO, Y., FUKUDA, H., KNEBELSBERGER, T. & SCHRÖDL, M. (2010) On the origin of Acochlidia and other enigmatic euthyneuran gastropods, with implications for the systematics of Heterobranchia. BMC Evolutionary Biology 10:323.

2008

BACK, W., KNEBELSBERGER, T. & MILLER, M. (2008) Molekularbiologische Untersuchungen und Systematik der palaearktischen Arten von Euchloe HÜBNER, [1819] (Lepidoptera: Pieridae). Entomologische Zeitschrift 118 (4): 151-169.

2007

KNEBELSBERGER, T. & MILLER, M. (2007) Revision and phylogeny of the subaptera-group of Phyllodromica (Blattoptera: Blattellidae: Ectobiinae), including a parthenogenetic species and the evaluation of COI sequences for species identification (DNA barcoding). Zootaxa 1522: 1-68.

2006

BACK, W., KNEBELSBERGER, T. & MILLER, M. (2006) The phylogenetic relationships of the species and subspecies of the subgenus Elphinstonia Klots, 1930. Atalanta 37 (3/4): 469-482.

BACK, W., KNEBELSBERGER, T. & MILLER, M. (2006) Molecular investigations of the species of the genus Anthocharis Boisduval, Rambur, Duméril & Graslin, 1833 with special focus on the cardamines – group (Lepidoptera : Pieridae). Linneana Belgica 20 (6): 245-253.

2005

KNEBELSBERGER, T., SCHWABE, E. & SCHRÖDL, M. (2005) Molluscan types of the Bavarian state collection of Zoology Munich (ZSM) Part 1. Polyplacophora, Scaphopoda, Cephalopoda. Spixiana 28 (2): 97-108.

2003

KNEBELSBERGER, T. & BOHN, H. (2003) Geographic parthenogenesis in the subaptera-group of Phyllodromica (Blattoptera, Blattellidae, Ectobiinae). Insect Systematics and Evolution 34: 427-452.

 

Nicht begutachtete Publikationen:

2010

KNEBELSBERGER, T., DITZLER, S., LAAKMANN, S., MOHRBECK, I. & RAUPACH, M.J. (2010). Molecular techniques for identifying North Sea fauna. In: Nimis P.L., Vignes Lebbe R., editors. Tools for Identifying Biodiversity: Progress and Problems – p.349;; ISBN 978-88-8303-295-0.

RAUPACH, M.J., KNEBELSBERGER, T. & LAAKMANN, S. (2010). Molekulare Taxonomie mariner Organismen am Forschungsinstitut Senckenberg. GfBS Newsletter 24: 20-21.

DRÖGE, G., ZETZSCHE, H., RAUPACH, M.J. & KNEBELSBERGER, T. (2010). Hilfe zur Erfassung von Sammlungsdaten für Belege, Gewebe und DNA: eine standardisierte Formatvorlage. GfBS Newsletter 23: 15-17.

STÖGER, I., MARSHALL, B., SCHWABE, E., KNEBELSBERGER, T. & SCHRÖDL, M. (2010). Serialia or not Serialia? Adding three monoplacophoran species to a multigene approach on basal molluscan phylogeny. Tropical Natural History Suppl. 3: 83.

2004

SCHRÖDL, M., HAUSDORF, B., KNEBELSBERGER, T., SCHWABE, E.  & WIESE, V. (2004). Inventory of molluscan types at the Zoologische Staatssammlung München (ZSM), the Zoologisches Museum der Universität Hamburg (ZMH), and the Haus der Natur, Cismar. In: Projects in the German national programme for the Global Biodiversity Information Facility 2003-2006, Status Report 2004 (G. Berendsohn & S. Oehlschlaeger, eds): 94-95.

2003

GLAUBRECHT, M., HAUSDORF, B., JANSSEN, R., KNEBELSBERGER, T., KÖHLER, F., NEUBERT, E., SCHRÖDL, M.  & WIESE, V. (2003). MOTYGER – MOlluscan TYpes of GERmany. In: Sustainable use and conservation of biological biodiversity, Symposium Report Part A, 1-4 December 2003, Berlin. 301-302.

Poster

2014

PAWLOWSKI, C., RAUPACH, M.J. & KNEBELSBERGER, T. Species identification using protein mass spectrometry: first investigations across metazoan diversity. 107. Jahrestagung der Deutschen Zoologischen Gesellschaft (11.-14.09.2014), Göttingen, Germany.

GÜNTHER, B., RAUPACH, M.J. & KNEBELSBERGER, T. Analyzing Geman seafood products, using DNA barcoding. BioDivEvo (24.03.-27.03.2014), Dresden, Germany.

2013

KNEBELSBERGER, T., LAAKMANN, S.: Integrating morphology, DNA barcodes and proteome fingerprints for the identification of marine metazoan species. 5th International Barcode of Life Conference (27.10.-31.10.2013), Kunming, China.

2011

KNEBELSBERGER, T., GEIGER, M., HENDRICH, L., HOFMANN, T., LAAKMANN, S., NEUMANN, H., RAUPACH, M.J. & HASZPRUNAR, G.: Identifying German freshwater and marine fishes through DNA barcoding. 4th International Barcode of Life Conference (30.11.-03.12.2011), Adelaide, Australia.

LAAKMANN, S., HOLST, S., KNEBELSBERGER, T., RAUPACH, M.J., MARTÌNEZ ARBIZU, P. & MOHRBECK, I.:Application of molecular genetic tools in the assessment of North Sea zooplankton diversity. 4th International Barcode of Life Conference (30.11.-03.12.2011), Adelaide, Australia.

RAUPACH, M.J., BEERMANN, J., KNEBELSBERGER, T., LAAKMANN, S., MOHRBECK, I. & NEUMANN, H.: DNA barcoding of Crustaceans from the North Sea. 4th International Barcode of Life Conference (30.11.-03.12.2011), Adelaide, Australia.

MOHRBECK, I., LAAKMANN, S., KNEBELSBERGER, T. & RAUPACH, M.J.: First insights into the molecular diversity of the North Sea zooplankton. 5th International Zooplankton Production Symposium (14.-18.03.2011), Pucón, Chile.

KNEBELSBERGER, T., LAAKMANN, S., MOHRBECK, I. & RAUPACH, M.J.: Biodiversiy assessment of t he North Sea fauna using molecular techniques. Biosystematics (21.-27.02.2011), Berlin, Germany.

2010

RAUPACH, M.J., KNEBELSBERGER, T., LAAKMANN, S. & MOHRBECK, I.: Species identification of the North Sea fauna using molecular methods. International Conference on Biodiversity and the UN Millenium Development Goals: Challenges for Research and Action (01.-03.12.2010), Frankfurt/Main, Germany.

KNEBELSBERGER, T., LAAKMANN, S., MOHRBECK, I. & RAUPACH, M.J.: Die Fauna der Nordsee – Molekulare Methoden zur Erfassung der Artenvielfalt. WissensWerte – Bremer Forum für Wissenschaftsjournalismus (08.-10.11.2010), Bremen, Germany.

KNEBELSBERGER, T., DITZLER, S., LAAKMANN, S., MOHRBECK, I. & RAUPACH, M.J.: Molecular techniques for identifying North Sea fauna. Bioidentify – Tools for identifying biodiversity: progress and problems (20.-22.09.2010), Paris, France.

LAAKMANN, S., MOHRBECK, I., KNEBELSBERGER, T., DITZLER, S. & RAUPACH, M.J.: The marine fauna of the North Sea: species identification using molecular methods. 103. Jahrestagung der Deutschen Zoologischen Gesellschaft (17.-21.09.2010), Hamburg, Germany.

2008

KNEBELSBERGER, T., GEMEINHOLZER, B., HASZPRUNAR, G., KLENK, H.-P., STÖGER, I., & WÄGELE, J.-W.:Request for DNA donations. Deutsche Zoologische Gesellschaft 101. Annual Meeting (19.-22.09.2008), Jena, Germany.

ZETZSCHE, H., KLENK, H.-P., RAUPACH, M. J., KNEBELSBERGER, T., & GEMEINHOLZER, B.: Comparison of methods and protocols for routine DNA extraction in the DNA Bank Network. Systematics  (07.-11.04.2008), Göttingen, Germany.

2017

(Invited speaker) KNEBELSBERGER, T. (2017) Molekulare Methoden zur Analyse von Fischprodukten – Ergebnisse einer genetischen Bestandsaufnahme aus dem Kühlregal. BVLK (Bundesverband der Lebensmittelkontrolleure) INTERNATIONALE ARBEITSTAGUNG BERLIN (16.10.2017 – 18.10.2017), Deutschland.   KNEBELSBERGER, T., GÜNTHER, B., KAISER, S., LAAKMANN, S. (2017) Monitoring marine biodiversity in the North-East Atlantic using DNA barcoding, proteome fingerprinting, and environmental DNA analysis. 7th International Barcode of life conference (20.-24.11.2017), South Africa.

2013

KNEBELSBERGER, T., COSTA, F.O., LAAKMANN, S., LANDI, M. & THIEL R.: Evaluation of DNA barcoding and proteome fingerprints for the identification of fish species from the Northern European shelf. 5th International Barcode of Life Conference (27.10.-31.10.2013), Kunming, China.

2012

KNEBELSBERGER, T., DUBLIER, N., LAAKMANN, S., HOFMANN, T. & RAUPACH M., J.: Identification of North Sea fish using DNA barcoding and ribosomal RNA in situ hybridization techniques. Fish Barcode of Life World Conference (12.06.-14.06.2012), Yeosu, Korea.

2011

KNEBELSBERGER, T., DUBLIER, N., LAAKMANN, S., RAUPACH, M.J. & HOFMANN, T.: The next step: rapid molecular in situ species identification. 4th International Barcode of Life Conference (30.11.-03.12.2011), Adelaide, Australia.

RAUPACH, M.J., LAAKMANN, S., MOHRBECK, I. & KNEBELSBERGER, T.: Biodiversity assessment of the North Sea fauna using DNA barcodes and other molecular methods. 4th International Barcode of Life Conference (30.11.-03.12.2011), Adelaide, Australia.

LAAKMANN, S., MOHRBECK, I., KNEBELSBERGER, T. & RAUPACH, M.J.: Do we know the known? Zooplankton biodiversity of the North Sea. 5th International Zooplankton Production Symposium (14.-18.03.2011), Pucón, Chile.

2010

STÖGER, I., MARSHALL, B.A., SCHWABE, E., KNEBELSBERGER, T. & SCHRÖDL, M.: Serialia or not Serialia? Adding three monoplacophoran species to a multigene approach on basal molluscan phylogeny. World Congress of Malacology, (18.-24.07.2010), Phuket, Thailand.

2009

KNEBELSBERGER, T., BATTKE, F., GEMEINHOLZER, B., KLENK, H.-P., RAUPACH, M.J., STÖGER, I., WÄGELE, J.-W., ZETZSCHE, H. & HASZPRUNAR, G.: Beyond Barcoding – Secure DNA Storage. 3rd International Barcode of Life Conference (07.-13.11.2009), Mexico City, Mexico.

KNEBELSBERGER, T. & HASZPRUNAR, G.: Initial results of DNA storage experiments. Systematics 2009 (10.-14.09.2009), Leiden, Netherlands.

KNEBELSBERGER, T.: Establishement of a DNA Bank Network in Germany. EES (Evolution, Ecology and Systematics) Conference 2008 (01.-02.10.2009),  Munich, Germany.

2008

KNEBELSBERGER, T. & HASZPRUNAR, G.: DNA-Banken als Serviceeinrichtungen und Ressourcen, (19.06.2008), Munich, Germany.

2002

KNEBELSBERGER, T.: Geographic Parthenogenesis in the Phyllodromica subaptera species complex (Blattoptera, Blattellidae, Ectobiinae). The 8th Meeting of PhD Students in Evolutionary Biology (28.08.-01.09.2002) Lohja, Finnland.

 

Forschungsgebiete  

Begutachtete Publikationen: 

https://senckenberg.academia.edu/AndreaBarco

2013
BARCO, A. HOUART, R. BONOMOLO, G., CROCETTA, F. & OLIVERIO, M. (2013). Molecular data reveal cryptic lineages within the northeastern Atlantic and Mediterranean small mussel drills of the Ocinebrina edwardsii complex (Mollusca: Gastropoda: Muricidae). Zoological Journal of the Linnean Society 169, 389-407.

BARCO, A., EVANS, J., SCHEMBRI, P., TAVIANI, M. & OLIVERIO., M. (2013). Testing the applicability of DNA barcoding for Mediterranean species of top-shells (Gastropoda, Trochidae, Gibbula s. l.). Marine Biology Research 9, 785-793.

BARCO, A., CORSO, A. & OLIVERIO, M. (2013). Endemicity in the Gulf of Gabès: the small mussel drill Ocinebrina hispidula is a distinct species of the Ocinebrina edwardsii complex (Muricidae: Ocenebrinae). Journal of Molluscan Studies 79, 273-276.

2012
BARCO, A., SCHIAPARELLI, S., HOUART, R. & OLIVERIO, M. (2012). Cenozoic evolution of Muricidae (Mollusca, Neogastropoda) in the Southern Ocean, with the description of a new subfamily. Zoological Scripta 41, 596-616.

2011
CROCETTA, F., BONOMOLO, G., ALBANO, P., BARCO, A., HOUART, R. & OLIVERIO, M. (2011). The status of the North-eastern Atlantic and Mediterranean small mussel-drills of the Ocinebrina aciculata complex (Mollusca: Gastropoda: Muricidae), with the description of a new species. Scientia Marina 76, 177-189.

2010
BARCO, A., CLAREMONT, M., REID, D. G., HOUART, R., BOUCHET, P., WILLIAMS, S. T., CRUAUD, C., COULOUX, A. & OLIVERIO, M. (2010). A molecular phylogenetic framework for the Muricidae, a diverse family of carnivorous gastropods. Molecular Phylogenetics and Evolution 56, 1025-1039.

2009
OLIVERIO, M., BARCO, A., MODICA, M. V., RICHTER, A. & MARIOTTINI, P. (2009). Ecological barcoding of corallivory by ITS2 sequences: hosts of coralliophiline gastropods detected by the cnidarian DNA in their stomach. Molecular Ecology Resources 9, 94-103.

OLIVERIO, M., BARCO, A., RICHTER, A. & MODICA, M. V. (2009). The coralliophilines radiation: repeated colonizations of the deep? Nautilus 123, 113-120.

 

Nicht begutachtete Publikationen

2013
ALVARO, M. C., BARCO, A., BÖHMER, A., DAVID, B., DE RIDDER, C., DUBOIS, P., D’UDEKEM D’ACOZ, C., ELÉAUME, M., GUTT, J., JANUSSEN, D., KERSKEN, D., LÓPES GONZÁLES, P., MARTINEZ BARALDÉS, I., VERHEYE, M., TEIXIDÒ ULLOD, N. (2013). Macrobenthic community analysis and biodiversity study. In Julian Gutt (ed.): The Expedition of the research vessel “Polarstern” to the Antarctic in 2013 (ANT-XXIX/3). Berichte zur Polar- und Meeresforschung, 665. http://hdl.handle.net/10013/epic.41835.

ALVARO, M. C., BARCO, A. (2013). Symbioses. In J. Gutt (ed.): The Expedition of the research vessel “Polarstern” to the Antarctic in 2013 (ANT-XXIX/3). Berichte zur Polar- und Meeresforschung, 665. http://hdl.handle.net/10013/epic.41835.

Abstracts und Poster

2013
SCHIAPARELLI, S., ALVARO, M. C., BARCO, A., FASSIO, G., MODICA, M. V., OLIVERIO, M. (2013). The project BAMBi (Barcoding of Antarctic Marine Biodiversity) at Terra Nova Bay (Ross Sea): first results and ongoing collaborations. In: Proceeding of the XIth SCAR Biology Symposium. Barcelona, Spain, 15-19 July 2013.

2011
BARCO, A., SCHIAPARELLI, S., HOUART, R., OLIVERIO, M. (2011). Pagodulinae: a new subfamily of Muricidae. In: Molluscan Forum 2011. London, Natural History Museum, 30 November 2011.

ALVARO, M. C., OLIVERIO, M., BARCO, A., READ, G., SCHIAPARELLI, S. 2011. From New Zealand to Antarctica and back: a round-trip ticket for symbiotic polychaetes. In: World Conference on Marine Biodiversity. Aberdeen, Scotland,  26-30 September 2011.

BARCO, A. (2012). The effects of climatic and oceanographic patterns in shaping the Antarctic marine fauna. Invited talk at the Biology Department of the University of Hawaii at Manoa, 13 January 2011.

2008
BARCO, A., OLIVERIO, M. (2008). A molecular phylogeny of Muricidae. In: 5th Congress of the European Malacological Society. S. Miguel, Azores, 2-6 September 2008: 33.

2007
OLIVERIO, M., RICHET, A., BARCO, A., MODICA, M. V. (2007). The Coralliophilinae radiation: repeated dives into the deep? In: World Congress of Malacology. Antwerp, 15-20 July 2007: 160.

2006
PIGNATTI, J., DI VINCENZO, F., BARCO, A., CAPURSO, S., CAZZOLI, R., CONIGLIO, A., DI DOMENICO, G., GIORGI, I., REGINE, D., TRIZZINO, M., VELLA, N., WAGENSOMMER, R. (2006). An (in)ordinate fondness for diversity: the fossil record of the Hexapoda. In: Giornate di Paleontologia 2006, Trieste, 8-11 June 2006.

DZMB Taxonomie
DZMB Taxonomie