Publications

Selected publications are listed below. For a full list of publications see Google Scholar page.

Bista, I.*, Wood, J. M. D., Desvignes, T., McCarthy, S. A., Matschiner, M., Ning Z., Tracey A., Torrance J., Sims Y., Chow W., Smith M., Oliver K., Haggerty L., Salzburger W., Postlethwait J.H., Howe K., Clark M.S., Detrich III H.W., Cheng C.H.C., Miska E.A., Durbin R.*, (2023). Genomics of cold adaptations in the Antarctic notothenioid fish radiation, Nature Communications, 14, 3412. (*Corresponding author).

Formenti G., Theissinger K., Fernandes C., Bista I., Bombarely A., Bleidorn C., Ciofi C., Crottini A, Godoy J.A., Höglund J., Malukiewicz J., Mouton A., Oomen R. A., Paez S., Palsbøll P. J, Pampoulie C., Ruiz-López M.J, Svardal H., Theofanopoulou C., deVries J., Waldvogel A.M., Zhang G., Mazzoni C.J., Jarvis E.D., Bálint M., and The European Reference Genome Atlas (ERGA) Consortium. (2022). The era of reference genomes in conservation genomics. Trends in Ecology & Evolution, 37(3), 197–202.

Dahn H. A., Mountcastle J., Balacco J., Winkler S., Bista I., Schmitt A. D., Vinnere-Pettersson O., Formenti G., Oliver K., Smith M., Tan W., Kraus A., Mac S., Komoroske L. M., Lama T., Crawford A. J., Murphy R. W., Brown S., Scott A. F., Morin P. A, Jarvis A. D., Fedrigo O. (2022). Benchmarking ultra-high molecular weight DNA preservation protocols for long-read and long-range sequencing. GigaScience, Vol. 11, (2022), giac068.  

Rhie A., McCarthy S. A., Fedrigo O., Damas J., Formenti G., Koren, S., Uliano-Silva M., Chow W., Fungtammasan A., Kim J., Lee C., Ko B. J., Chaisson M., Gedman G. L., Cantin L. J., Thibaud-Nissen F., Haggerty L., Bista I., Smith M., … Jarvis E. D.  (2021). Towards complete and error-free genome assemblies of all vertebrate species. Nature, 592(7856), 737–746.

Bohmann K., Elbrecht V., Carøe C., Bista I., Leese, F., Bunce M., Yu D.W, Seymour M., Dumbrell A.J., Creer S. (2022). Strategies for sample labelling and library preparation in DNA metabarcoding studies. Molecular Ecology Resources, 22(4), 1231–1246.

Bista I.*, Carvalho G. R., Tang M., Walsh K., Zhou X., Hajibabaei M., Shokralla S., Seymour M., Bradley D., Liu S., Christmas M., Creer S.* (2018). Performance of amplicon and shotgun sequencing for accurate biomass estimation in invertebrate community samples. Molecular Ecology Resources, 1–15 (*Corresponding author).

Bista I. *, Carvalho G.R., Walsh K., Seymour M., Hajibabaei M., Lallias D., Christmas M., Creer S.* (2017). Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity. Nature Communications, 8, 14087 (*Corresponding author).